Added nf-test for pairtools/stats

modules/nf-core/pairtools/stats/tests/main.nf.test

@@ -0,0 +1,33 @@
+
+nextflow_process {
+
+    name "Test Process PAIRTOOLS_STATS"
+    script "../main.nf"
+    process "PAIRTOOLS_STATS"
+
+    tag "modules"
+    tag "modules_nfcore"
+    tag "pairtools"
+    tag "pairtools/stats"
+
+    test("test-pairtools-stats") {
+
+        when {
+            process {
+                """
+                input[0] = [ [ id:'test', single_end:false ], // meta map
+				file(params.modules_testdata_base_path + 'genomics/homo_sapiens/pairtools/mock.pairsam', checkIfExists: true) ]
+
+                """
+            }
+        }
+
+        then {
+            assertAll(
+                { assert process.success },
+                { assert snapshot(process.out).match() }
+            )
+        }
+    }
+
+}

modules/nf-core/pairtools/stats/tests/main.nf.test.snap

@@ -0,0 +1,37 @@
+{
+    "test-pairtools-stats": {
+        "content": [
+            {
+                "0": [
+                    [
+                        {
+                            "id": "test",
+                            "single_end": false
+                        },
+                        "test.pairs.stat:md5,77a1b2b0b146e00313435f4a707d2d0d"
+                    ]
+                ],
+                "1": [
+                    "versions.yml:md5,97ccf9babab2e888f52934164b9ef0d8"
+                ],
+                "stats": [
+                    [
+                        {
+                            "id": "test",
+                            "single_end": false
+                        },
+                        "test.pairs.stat:md5,77a1b2b0b146e00313435f4a707d2d0d"
+                    ]
+                ],
+                "versions": [
+                    "versions.yml:md5,97ccf9babab2e888f52934164b9ef0d8"
+                ]
+            }
+        ],
+        "meta": {
+            "nf-test": "0.8.4",
+            "nextflow": "24.04.4"
+        },
+        "timestamp": "2024-08-23T11:05:50.844045"
+    }
+}

tests/config/pytest_modules.yml

@@ -1022,9 +1022,6 @@ pairtools/select:
 pairtools/sort:
   - modules/nf-core/pairtools/sort/**
   - tests/modules/nf-core/pairtools/sort/**
-pairtools/stats:
-  - modules/nf-core/pairtools/stats/**
-  - tests/modules/nf-core/pairtools/stats/**
 panaroo/run:
   - modules/nf-core/panaroo/run/**
   - tests/modules/nf-core/panaroo/run/**