Important! Template update for nf-core/tools v3.0.1 #3380
GitHub Actions / JUnit Test Report
failed
Oct 9, 2024 in 0s
2 tests run, 0 passed, 0 skipped, 2 failed.
Annotations
Check failure on line 1 in Test pipeline without a group type for featureCounts
github-actions / JUnit Test Report
Test pipeline without a group type for featureCounts.Params: --featurecounts_group_type false
Assertion failed:
2 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/tests/../main.nf` [astonishing_fermat] DSL2 - revision: b67fa8fbe5
Downloading plugin [email protected]
ERROR ~ Extension 'fromList' it isn't defined by plugin nf-schema
-- Check script '/home/runner/work/rnaseq/rnaseq/./workflows/rnaseq/main.nf' at line: 53 or see '/home/runner/work/rnaseq/rnaseq/~/tests/4eebe4fc681b15c3d259418d91762bd5/meta/nextflow.log' file for more details
Nextflow stderr:
Nextflow 24.04.4 is available - Please consider updating your version to it
Check failure on line 1 in Test pipeline without a group type for featureCounts
github-actions / JUnit Test Report
Test pipeline without a group type for featureCounts.Params: --featurecounts_group_type false - stub
Assertion failed:
2 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/tests/../main.nf` [compassionate_hoover] DSL2 - revision: b67fa8fbe5
ERROR ~ Extension 'fromList' it isn't defined by plugin nf-schema
-- Check script '/home/runner/work/rnaseq/rnaseq/./workflows/rnaseq/main.nf' at line: 53 or see '/home/runner/work/rnaseq/rnaseq/~/tests/7ed288f7b5d8093a4d80900f4076c3d1/meta/nextflow.log' file for more details
Nextflow stderr:
Nextflow 24.04.4 is available - Please consider updating your version to it
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