Important! Template update for nf-core/tools v3.0.1 #3380
GitHub Actions / JUnit Test Report
failed
Oct 9, 2024 in 0s
2 tests run, 0 passed, 0 skipped, 2 failed.
Annotations
Check failure on line 1 in Test pipeline with ribosomal RNA removal
github-actions / JUnit Test Report
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna
Assertion failed:
2 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/tests/../main.nf` [soggy_gautier] DSL2 - revision: b67fa8fbe5
Downloading plugin [email protected]
ERROR ~ Extension 'fromList' it isn't defined by plugin nf-schema
-- Check script '/home/runner/work/rnaseq/rnaseq/./workflows/rnaseq/main.nf' at line: 53 or see '/home/runner/work/rnaseq/rnaseq/~/tests/24a1e6e4fae5e89ee40055637c1d558b/meta/nextflow.log' file for more details
Nextflow stderr:
Nextflow 24.04.4 is available - Please consider updating your version to it
Check failure on line 1 in Test pipeline with ribosomal RNA removal
github-actions / JUnit Test Report
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna - stub
Assertion failed:
2 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/tests/../main.nf` [adoring_cajal] DSL2 - revision: b67fa8fbe5
ERROR ~ Extension 'fromList' it isn't defined by plugin nf-schema
-- Check script '/home/runner/work/rnaseq/rnaseq/./workflows/rnaseq/main.nf' at line: 53 or see '/home/runner/work/rnaseq/rnaseq/~/tests/9850e8cd6173f7f9513c08fb3f75026d/meta/nextflow.log' file for more details
Nextflow stderr:
Nextflow 24.04.4 is available - Please consider updating your version to it
Loading