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v0.2.0dev #8

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merged 51 commits into from
May 5, 2023
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fbd3a4e
Update r1_r2_from_ena_fastq. Add version string
TCLamnidis Apr 17, 2023
ff4241e
Version tracking
TCLamnidis Apr 17, 2023
a3124aa
Added columns with symlink target fn. version tracking.
TCLamnidis Apr 17, 2023
d6be8cc
keep only needed columns. version tracking
TCLamnidis Apr 17, 2023
0608253
version bugfix
TCLamnidis Apr 17, 2023
31af81f
add pipefail and variable check
TCLamnidis Apr 17, 2023
3365b80
Add Changelog
TCLamnidis Apr 18, 2023
e2301cf
Update github actions.
TCLamnidis Apr 18, 2023
f67e55e
Make tsv_patch executable
TCLamnidis Apr 18, 2023
6a1b58c
Use absolute paths in expected_md5sums.txt
TCLamnidis Apr 18, 2023
36ee623
deactivate unbound variable errors
TCLamnidis Apr 18, 2023
1d0323d
ignore raw_sequencing_data
TCLamnidis Apr 18, 2023
bee2d5a
Add version info
TCLamnidis Apr 18, 2023
81b2f34
remove old option string
TCLamnidis Apr 18, 2023
df7552e
remove debug printing
TCLamnidis Apr 18, 2023
a14771c
update local data dir
TCLamnidis Apr 18, 2023
721d6d0
Add script to do all local steps in one
TCLamnidis Apr 18, 2023
7687f09
update config files. Add versioning
TCLamnidis Apr 20, 2023
b21affe
fix config suffix
TCLamnidis Apr 20, 2023
9ab7958
add eager dirs to gitignore
TCLamnidis Apr 20, 2023
23f1829
add generic array submission from txt file script
TCLamnidis Apr 20, 2023
d6c7530
initial run_eager.sh commit
TCLamnidis Apr 20, 2023
579d756
tower bugfix
TCLamnidis Apr 24, 2023
2690130
add ss suffix for ss libs in symlinks
TCLamnidis Apr 24, 2023
5932b22
Add package config version.
TCLamnidis Apr 24, 2023
0001527
add githubb url to poseidon config
TCLamnidis Apr 24, 2023
8f87554
bugfix. no duplicate version lines
TCLamnidis Apr 24, 2023
d2ffddf
run eager when package cofig is updated.
TCLamnidis Apr 24, 2023
1a757d1
Updated CHANGELOG.md
TCLamnidis Apr 24, 2023
ab3c46e
Issue request templates
TCLamnidis Apr 24, 2023
4f36962
Update GH issue config and CHANGELOG
TCLamnidis Apr 24, 2023
08d46cd
correct changelog version number
TCLamnidis Apr 25, 2023
b9b84bf
Add date to CHANGELOG
TCLamnidis Apr 25, 2023
da5be88
Homogenise script versions
TCLamnidis Apr 25, 2023
a23e123
move issue template dir
TCLamnidis Apr 25, 2023
859077c
explanatory comments
TCLamnidis Apr 25, 2023
d5cd4de
Add PR template. update issue templates and delphis-bot
TCLamnidis Apr 25, 2023
6ff4752
Update CHANGELOG.md
TCLamnidis Apr 25, 2023
332590a
Update Changelog
TCLamnidis Apr 25, 2023
9f832e9
typo
TCLamnidis Apr 25, 2023
0052588
Apply suggestions from code review
TCLamnidis Apr 26, 2023
cee00d8
Merge branch 'dev' of github.com:poseidon-framework/poseidon-eager in…
TCLamnidis Apr 26, 2023
7b79193
change to active checklist
TCLamnidis May 4, 2023
7934734
check issues too. clearer that given doi and accession are examples.
TCLamnidis May 4, 2023
85f75dc
clearer example. active rephrasing
TCLamnidis May 4, 2023
53e4a91
Harshil align
TCLamnidis May 4, 2023
61a2fbd
add reminder TODO for aspera
TCLamnidis May 4, 2023
f26657b
Add note about local paths
TCLamnidis May 4, 2023
4ac4b2f
move local_path profile to EVA config
TCLamnidis May 4, 2023
ca4be8b
rename Poseidon to Minotaur
TCLamnidis May 4, 2023
a83237c
Added comment explaining the file's purpose
TCLamnidis May 4, 2023
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correct changelog version number
  • Loading branch information
TCLamnidis committed Apr 25, 2023
commit 08d46cd647d03166bdaf83aff331ddf32b1194a0
2 changes: 1 addition & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## v1.0.0dev - [date]
## v0.2.0dev - [date]

### `Added`

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