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Issues: satijalab/seurat
Solution:
object 'CRsparse_colSums' not found
raised after ...
#8202
opened Dec 18, 2023 by
dcollins15
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Issues list
How to extract the spatial coordinate from a Seurat object with Visium samples?
#9431
opened Oct 27, 2024 by
HelloWorldLTY
Should I run SCTranform on each demultiplexed sample individually?
#9428
opened Oct 25, 2024 by
weishwu
v5 FindAllMarkers avg_log2FC values diverge from Wilcoxon results
bug
Something isn't working
#9426
opened Oct 25, 2024 by
michael-r-odea
FeaturePlot arguments only applying to last plot with use of split.by function
#9425
opened Oct 24, 2024 by
sadhnarao
Integration with SCT and impossibility to perform DEG on RNA assay
documentation
Error in documentation
#9424
opened Oct 24, 2024 by
Behind42
Error in FindNeighbors with dims set to NULL
bug
Something isn't working
#9420
opened Oct 22, 2024 by
petrenkokate
Function "SelectIntegrationFeatures" For Which Data Assay?
#9418
opened Oct 22, 2024 by
ForrestGump618
automatic batch correction with seurat v5 SCT on spatial data?
#9416
opened Oct 21, 2024 by
mistrm82
FindSpatiallyVariableFeatures giving "Please provide the same number of observations as spatial locations" error
bug
Something isn't working
#9415
opened Oct 21, 2024 by
elifozcelik
The difference between FindVariableFeatures and HVFInfo
#9414
opened Oct 21, 2024 by
noranekonobokkusu
SplitObject of 10x Visium spatial Seurat Object retains all spatial images
#9413
opened Oct 21, 2024 by
strawberry098
WhichCell()
for marker names with dashes from ADT
assay returned error of None of the requested variables were found
, even when using backticks
bug
#9411
opened Oct 20, 2024 by
denvercal1234GitHub
What is the expected directory structure for Load10X_Spatial? Having issues importing Visium HD Data.
bug
Something isn't working
#9410
opened Oct 18, 2024 by
kokodur
CCAIntegration Approach in IntegrateLayers does not use InterableMatrix from BPCells
bug
Something isn't working
#9408
opened Oct 17, 2024 by
Victor21v
Reproducing scVI result in Seurat v5 vignette
documentation
Error in documentation
#9406
opened Oct 16, 2024 by
shwong-tw
Banksy Code error: order(labels.loc[, id]) : argument 1 is not a vector
bug
Something isn't working
#9404
opened Oct 16, 2024 by
salasd
Warning message: “package ‘Seurat’ was built under R version 4.3.2”
documentation
Error in documentation
#9402
opened Oct 15, 2024 by
ASNbioinf
Scaling on Variable Features only and all Features yields different UMAP projections on subsampled or split data
bug
Something isn't working
#9401
opened Oct 15, 2024 by
JurMich
Unable to reproduce tutorial - Seurat - Guided Clustering Tutorial
#9399
opened Oct 14, 2024 by
holiday01
bug about the definetion of RowVarSparse in RunPCA
bug
Something isn't working
#9396
opened Oct 12, 2024 by
NormalLomo
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