vg stats option to print snarl contents #4383
Merged
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Changelog Entry
To be copied to the draft changelog by merger:
vg stats --snarl-contents
added to print a table ofsnarl
/depth
/parent
/nested node ids
Description
quick and dirty. as requested by @lh3 since VCF AT field do not always exactly represent the graph (because equivalent alleles with different paths get merged) and I don't think there's any existing way of getting snarl contents from the CLI.