Matrix_dimred_v31

!xmipp_matrix_dimred (v3.1)

Usage

This program takes an input matrix, whose rows are individual observations and projects each sample onto a lower dimensional space using the selected method

Parameters

$``: Input matrix with data. Each observation is a row. $-o <output> $`-m <dimRefMethod`PCA> where <dimRefMethod> can be:

• • $--dout <d2> <method=CorrDim> where <method> can be:
  • CorrDim
  • $--saveMapping <fn> $: Input dimension $: Number of observations in the input matrix

Examples and notes

xmipp_matrix_dimred -i matrixIn.txt -o matrixOut.txt --din 30 --dout 2 --samples 1000

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